# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim: fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
categories-append science
maintainers {gmail.com:giovanni.bussi @GiovanniBussi} openmaintainer
description An object-oriented toolkit to analyze molecular dynamics trajectories generated by CHARMM, Gromacs, NAMD, LAMMPS, or Amber.
long_description ${description} \
It also reads other formats (e.g. PDB files and XYZ format trajectories. \
It can write most of the coordinate formats, too, together with atom selections for use \
in Gromacs, CHARMM, VMD and PyMOL.
homepage https://www.mdanalysis.org/
master_sites pypi:[string index ${python.rootname} 0]/${python.rootname}
distname ${python.rootname}-${version}
checksums rmd160 7dab230b0e9770eeb0f760310660fe26dd70d9b2 \
sha256 c5395bbafa5efca2e1aee4715d26129844140c47cb8301da0293106cb969de7d \
if {${name} ne ${subport}} {
# See https://github.com/macports/macports-ports/pull/3902 for an attempt to fix the issue
build.env-append MDA_USE_OPENMP=0
depends_build-append port:py${python.version}-setuptools
depends_lib-append port:py${python.version}-biopython \
port:py${python.version}-GridDataFormats \
port:py${python.version}-gsd \
port:py${python.version}-joblib \
port:py${python.version}-matplotlib \
port:py${python.version}-mock \
port:py${python.version}-mmtf-python \
port:py${python.version}-networkx \
port:py${python.version}-numpy \
port:py${python.version}-scipy \
port:py${python.version}-six