casa-mp-base

# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4

# $Id$

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PortSystem              1.0

PortGroup               python26 1.0

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name                    py26-pymvpa

version                 0.4

epoch                   1

categories              python

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platforms               darwin

maintainers             jameskyle

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description             PyMVPA is a Python module intended to ease pattern classification analyses of large datasets.

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long_description        ${description}. In the neuroimaging contexts such analysis techniques are also known as decoding or MVPA analysis. PyMVPA provides high-level abstraction of typical processing steps and a number of implementations of some popular algorithms.

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homepage                http://www.pymvpa.org

fetch.type              git

git.url                 https://github.com/PyMVPA/PyMVPA.git

git.branch              maint/${version}

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depends_lib             port:py26-numpy \

                        port:git-core \

                        port:py26-distribute \

                        port:py26-scipy \

                        port:py26-pynifti \

                        port:py26-hcluster \

                        port:libsvm \

                        port:swig-python \

                        port:py26-pywavelets \

                        port:shogun \

                        port:py26-matplotlib \

                        port:py26-lxml

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depends_build           port:git-core

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configure.args          --with-system-libsvm

build.args              --with-system-libsvm

build.target            build

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pre-fetch {

    if {[file exists ${prefix}/share/doc/mvpa]} {

        ui_error "It appears the 2.5 version of mvpa is installed"

        ui_error "Only one version of pymvpa can be installed at one time"

        return -code error "multiple mvpa installs detected"

    }

​

​

    if {![variant_isset no_shogun]} {

      if {![file exists ${python.pkgd}/sg.so]} {

        ui_error "To install pymvpa with the shogun variant, shogun must be installed with the python variant."

        return -code error "incompatible shogun installation"

      }

    }

​

}

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variant no_shogun description {Do not build shogun} {

    depends_lib-delete port:shogun

}

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variant gcc43 conflicts gcc44 description {build with gcc 4.3} {

    depends_build-append port:gcc43

}

variant gcc44 conflicts gcc43 description {build with gcc 4.4} {

    depends_build-append port:gcc44

}

variant gcc45 conflicts gcc43 gcc44 description {build with gcc 4.5} {

    depends_build-append port:gcc45

}

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if {[variant_isset gcc43]} {

    set gccversion 4.3

} elseif {[variant_isset gcc45]} {

    set gccversion 4.5

} else {

    default_variants +gcc44

    set gccversion 4.4

}

​

set gccnumber [join [split ${gccversion} .] ""]

configure.compiler      macports-gcc-${gccversion}

configure.env           CC=${prefix}/bin/gcc-mp-${gccversion} \

                        CPP=${prefix}/bin/g++-mp-${gccversion}

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build.env-append        CC=${prefix}/bin/gcc-mp-${gccversion} \

                        CPP=${prefix}/bin/g++-mp-${gccversion} \

                        CCFLAGS="-I${prefix}/include -L${prefix}/lib" \