Pipeline
  1. Pipeline

pipeline

Public
AuthorCommitMessageCommit dateIssues
Rui XueRui Xue
85cf92dc6fbMPull request #1755: PIPE-2996: Cache casarundata in env setup templateMerge in PIPE/pipeline from cache-casarundata-in-env-setup-template to main * commit '32e17ed444ada97e6cbdf56cfc826e63d8473113': Remove the redundant `casaconfig` setup again in `test-unit.yml` Improve `casaconfig/casarundata` setup in the template with GH action cachingPIPE-2996
Rui XueRui Xue
261c8820cf8MPull request #1754: PIPE-2995: Add GitHub workflow for syncing with On-Prem BitbucketMerge in PIPE/pipeline from sync-bitbucket-github-repos-with-workflow to main * commit '598ae9e3096c183c8230659aa9a2caeb715ff123': PIPE-2995: Add GitHub workflow for syncing with On-Prem BitbucketPIPE-2995
Rui XueRui Xue
598ae9e3096PIPE-2995: Add GitHub workflow for syncing with On-Prem BitbucketPIPE-2995
Rui XueRui Xue
5dead9ae807MPull request #1729: Update GitHub workflows and environment configuration to include unit tests for VLASS-PL2026.Merge in PIPE/pipeline from unit-test-vlass2026 to main * commit 'd9b21b61a46e2b5984530ce12c589bfcbf4805cd': PIPE-2940: Improve test data checkout by adding a directory existence check before cloning the repository PIPE-2940: Add Pixi environment definitions for the PL2026 development PIPE-2940: add `nondefaults` to the channel configuration in `environment_vlass2026.yml` PIPE-2940: Up...PIPE-2940
Rui XueRui Xue
70ccb2d1e69MPull request #1733: PIPE-2937/PIPE-2929/PIPE-2982Merge in PIPE/pipeline from PIPE-2937-avoid-writing-large-tmp-large-images-from-the-nf-snr-calculation-function to main * commit '29110a640d1e0d17d853a7b45d55d91bb63ffa27': PIPE-2937: Bypass the `JobRequest` wrapper layer for direct `casaplotms` execution and enable debug tracebacks for mask checking errors PIPE-2937: Reduce the number of used `iatool` instances and use in-place Boolean op...4 Jira issues
Rui XueRui Xue
29110a640d1PIPE-2937: Bypass the `JobRequest` wrapper layer for direct `casaplotms` execution and enable debug tracebacks for mask checking errorsPIPE-2937
Takeshi NakazatoTakeshi Nakazato
9e4f33aac7aMPull request #1727: PIPE-2894 always display channel axis to sparse profile mapMerge in PIPE/pipeline from PIPE-2894-hsd_baseline-add-channel-axis-to-the-top-panel-of-sparse-profile-map to main * commit '3a599a4f0e1e027e7f556d83ea70f672836bf335': move channel axis label upward slightly added note to docstring for add_channel_axis PIPE-2894 always display channel axis to sparse profile mapPIPE-2894
Kristin BerryKristin Berry
465285e01b8MPull request #1745: PIPE-2985: Update docs to reflect change to use launcher to access the Pipeline and context objectsMerge in PIPE/pipeline from PIPE-2985-update-developer-documentation-to-reflect-change-in-how-to-fetch-the-context to main * commit '84610e456d06c5b0b695a098e974859674ecf063': PIPE-2985: Update bullet-points to use - rather than o PIPE-2985: Remove outdated test instructions from docstrings. Similar test instructions exist in developer documentation markdown files. PIPE-2985: Remove unne...PIPE-2985
Kristin BerryKristin Berry
84610e456d0PIPE-2985: Update bullet-points to use - rather than oPIPE-2985
Rui XueRui Xue
86fc31bbafbMPull request #1744: PIPE-2916/PIPE-2986: Fix the offset search limit by using half of the cutout image size; improve observing_run handling in hif_transformimagedataMerge in PIPE/pipeline from PIPE-2916-fix-field-selection-limit to main * commit '42735b2555f8e61818dca1abd0914d087009175a': PIPE-2916: Rename `imaging_imsize` to `imsize_from_cutout` for clarity and update references in `editimlist` PIPE-2986: Streamline the MS object replacement logic in `hif_transformimagedata` and improve logging PIPE-2916: Update example output in docstring for `ima...2 Jira issues
Rui XueRui Xue
42735b2555fPIPE-2916: Rename `imaging_imsize` to `imsize_from_cutout` for clarity and update references in `editimlist`PIPE-2916
Vincent GeersKristin BerryVincent Geers
94268aa24afMPull request #1660: PIPE-2689: add new residual phase offset QA scores to hifa_diffgaincalMerge in PIPE/pipeline from PIPE-2689_hifa_diffgaincal_new_QA_score_for_residuals to main * commit '26306aec824fa25e46796a8667050d46ab51879f': PIPE-2689: Update to use built-in thresholds for scoring rather than magic number and update comments to reflect current state of scores. PIPE-2689: Update scores for poor and elevated cases to lower severity PIPE-2689: Remove code added to suppor...PIPE-2689
Kristin BerryKristin Berry
bfbbaa0368fPIPE-2985: Remove outdated test instructions from docstrings.Similar test instructions exist in developer documentation markdown files.PIPE-2985
Rui XueRui Xue
c803738bb10MPull request #1747: PIPE-2947: Pin scipy version to avoid compatibility issues with 1.17+Merge in PIPE/pipeline from PIPE-2947-restrict-scipy-versions to main * commit '0d175efa4b8737eb989c29f85733e0c8d38bc953': PIPE-2947: Pin scipy version to avoid compatibility issues with 1.17+PIPE-2947
Ajay VibhuteAjay Vibhute
10433a340afMPull request #1746: PIPE-2987: changing log level of message to 'info'Merge in PIPE/pipeline from PIPE-2987-set-log-level-to-info-for-message-in-phasecenter_to_skycoord to main * commit '0af3f3f8f1ef7bae96e03951988831d580ff1d44': PIPE-2987: changing log level of message to 'info'PIPE-2987
Rui XueRui Xue
0d4b78ef40cMPull request #1739: PIPE-2980: Save context snapshot before weblog rendering for loglevel debugMerge in PIPE/pipeline from PIPE-2980-save-context-snapshot-before-weblog-rendering-for-loglevel-debug-model to main * commit 'f4c6fb9eb954108ac509c86af0d1d8791bce9645': PIPE-2980: Save context snapshot before weblog rendering for loglevel debugPIPE-2980
Rui XueRui Xue
d9b21b61a46PIPE-2940: Improve test data checkout by adding a directory existence check before cloning the repositoryPIPE-2940
Rui XueRui Xue
0d175efa4b8PIPE-2947: Pin scipy version to avoid compatibility issues with 1.17+PIPE-2947
Kristin BerryKristin Berry
5129aacd04cPIPE-2985: Remove unneeded import statements and restore notebook execution count to 1PIPE-2985
Ajay VibhuteAjay Vibhute
0af3f3f8f1ePIPE-2987: changing log level of message to 'info'PIPE-2987
Rui XueRui Xue
59c8188f469PIPE-2940: Add Pixi environment definitions for the PL2026 developmentPIPE-2940
Rui XueRui Xue
14c61f65845PIPE-2986: Streamline the MS object replacement logic in `hif_transformimagedata` and improve loggingPIPE-2986
Kristin BerryKristin Berry
135cf978040PIPE-2985: Update docs to reflect change to use launcher to access the Pipeline and context objectsPIPE-2985
Rui XueRui Xue
1d80cb40e72PIPE-2916: Update example output in docstring for `imaging_imsize` to reflect the correct dimensionsPIPE-2916
Rui XueRui Xue
7be8cb45420PIPE-2916: Fix the offset search limit by using half of the cutout image size.PIPE-2916
Rui XueRui Xue
ff81a69f88bPIPE-2937: Reduce the number of used `iatool` instances and use in-place Boolean operators to further reduce peak memory usagePIPE-2937
Rui XueRui Xue
5d766135d6ePIPE-2982: Replace vectorized contour plotting of clean mask islands with raster boundary plotting, to avoid excess memory usage for large imagesPIPE-2982
Kristin BerryKristin Berry
26306aec824PIPE-2689: Update to use built-in thresholds for scoring rather than magic number and update comments to reflect current state of scores.PIPE-2689
Ajay VibhuteAjay Vibhute
1fc30b1c7acMPull request #1705: PIPE-2580: QA score for hifv_testBPdcalsMerge in PIPE/pipeline from PIPE-2580-hifv_testbpdcals-qa-criteria to main * commit '218b1b17a9dfa015c33d1ea932d343cdaa7ab02a': PIPE-2580: included bad refant/s in the weblog message PIPE-2580: Refactored the QA score calculation, using one function per QA metric. PIPE-2580: added applies_to to the QA scores PIPE-2580: returning score 1.0 when everything is fine, renamed ref_ant to ref...PIPE-2580
Luke MaudLuke Maud
0db75813d36MPull request #1723: PIPE-2915 use os.path.exists to check for presence of caltable edit gaincal logicMerge in PIPE/pipeline from PIPE-2915-stop-hifa_diffgaincal-crashing-if-the-first-diffgain-scan-group-set-is-fully-flagged to main * commit 'ebfc12707e30e2ab90b53f0e6464d67912cf99bd': PIPE-2915: Flatten the caltable appending logic for multiple scan groups in `DiffGaincal._do_phasecal`. PIPE-2915 use os.path.exists to check for presence of caltable edit gaincal logicPIPE-2915
Rui XueRui Xue
f4c6fb9eb95PIPE-2980: Save context snapshot before weblog rendering for loglevel debugPIPE-2980
Rui XueRui Xue
31e86a1d7c9PIPE-2937: Fix an issue with image removal before closing the associated `ia` instancesPIPE-2937
Rui XueRui Xue
448be2c8aedPIPE-2929: Fix a regression related to casa-compatble field name conversion, introduced when porting mosaic self-calibration (PIPE-2001)2 Jira issues
Ajay VibhuteRui XueAjay Vibhute
60282b613caMPull request #1713: PIPE-2166: potentially switch to doquantiles=False in visstat in hifa_polcalMerge in PIPE/pipeline from PIPE-2166-potentially-switch-to-doquantiles-false-in-visstat-in-hifa_polcal to main * commit '85d71ca40e6beb946daa6d00d757782c79edca31': PIPE-2166: removed continue PIPE-2166: removed extra whitespace PIPE-2166: code cleanup PIPE-2166: setting doquantiles= False in visstat cal in imageparams_vla PIPE-2166: setting doquantiles to False in visstatPIPE-2166
Rui XueRui Xue
8c358ee6dbePIPE-2937: Refactor `estimate_SNR` and `estimate_near_field_SNR` to avoid writing large temporary images, improving efficiency and memory usagePIPE-2937
Rui XueRui Xue
8a0f7c3bf61PIPE-2937: Refactor `create_noise_histogram` to improve efficiency and readability:- Remove temporary file handling. - Use `ia.histograms` for histogram calculation.PIPE-2937
Rui XueRui Xue
32e17ed444aRemove the redundant `casaconfig` setup again in `test-unit.yml`
Rui XueRui Xue
7140e2bf7b9Improve `casaconfig/casarundata` setup in the template with GH action caching
Ajay VibhuteAjay Vibhute
ab0dadfb132MPull request #1728: PIPE-2881: Add support for implicit and explicit units in phasecentre parsingMerge in PIPE/pipeline from PIPE-2881-vlass-phasecenter-in-parameter-list-format-flexibility to main * commit '13743f4c6175651be5e562d7b23bb078c6d69d67': PIPE-2881: adding unit tests for phasecenter_to_skycoord PIPE-2881: moved angle units to the top of module PIPE-2881:Fix dd.mm.ss Dec parsing PIPE-2881: Add support for implicit and explicit units in phasecentre parsingPIPE-2881
Shawn BoothShawn Booth
197e7c19f83MPull request #1735: PIPE-2142: Turn back on skipped testMerge in PIPE/pipeline from pipe-2142-turn-on-selfcal-test to main * commit '05b8cc54d4747ea1828827faf3dca5fa478f90ac': PIPE-2142: removed redundant test and switched new test to use previous results file PIPE-2142: turned back on test_13A_537__restore__cont_cube_selfcal__regression pending merge of pipeline-testdata mergePIPE-2142
Shawn BoothShawn Booth
05b8cc54d47PIPE-2142: removed redundant test and switched new test to use previous results filePIPE-2142
Shawn BoothShawn Booth
f6fde5f01f1PIPE-2142: turned back on test_13A_537__restore__cont_cube_selfcal__regression pending merge of pipeline-testdata mergePIPE-2142
Rui XueRui Xue
3aedaf8e0ccPIPE-2940: add `nondefaults` to the channel configuration in `environment_vlass2026.yml`PIPE-2940
Rui XueRui Xue
9ced50c5939PIPE-2940: Update coverage configuration to exclude additional lines and improve test reportingPIPE-2940
Rui XueRui Xue
1021a12af54Update GitHub workflows and environment configuration to include unit tests for VLASS-PL2026.- Modify build-gh-pages.yml to trigger on changes to `environment*.yml` - Update env-setup-run-template.yml to allow dynamic conda environment file input - Adjust test-unit.yml to support multiple conda environments and update artifact naming logic - Refine apisummary.rst to correct module references - Add `new environment_vlass2026.yml` for specific pipeline dependencies of VLASS-PL2026
Rui XueRui Xue
515cc8fead5MPull request #1734: PIPE-2738: reverse the broken change made in ca3e7aMerge in PIPE/pipeline from PIPE-2738-hotpatch-for-state-classes to main * commit '7d5d223acafa8e4278783226adbf21dbf4568913': PIPE-2738: reverse the broken change made in ca3e7aPIPE-2738
Rui XueRui Xue
7d5d223acafPIPE-2738: reverse the broken change made in ca3e7aPIPE-2738
Takeshi NakazatoTakeshi Nakazato
3a599a4f0e1move channel axis label upward slightly
Takeshi NakazatoTakeshi Nakazato
f0f64bcdf81added note to docstring for add_channel_axis
Hajime EzawaHajime Ezawa
6ad5949781aMPull request #1731: PIPE-2491 skip manipulating ms weight columnMerge in PIPE/pipeline from PIPE-2491-skip-manipulating-ms-weight-column to main * commit '2629116b177f236e2e9ae2652632e49b5ccd3b46': PIPE-2491: add 'updateweight=True' to sdbaseline call in baseline/worker.py PIPE-2491: remove weighting.py and related codesPIPE-2491