casa-mp-base

# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4

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PortSystem          1.0

PortGroup           cmake 1.1

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name                seqan-apps

version             2.4.0

revision            2

categories          science

platforms           darwin

universal_variant   no

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license             BSD LGPL-3 GPL-3

maintainers         fu-berlin.de:rene.rahn

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description         Applications distributed with the SeqAn library

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long_description    SeqAn applications for the analysis of large sets of sequences, e.g. \

                    read mapping, genome comparison, local alignment, data mining.

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homepage            https://www.seqan.de/applications/

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depends_lib-append  port:boost \

                    port:bzip2 \

                    port:zlib

depends_run-append  port:coinor-liblemon

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master_sites        http://packages.seqan.de/seqan-src

distfiles           seqan-src-${version}${extract.suffix}

distname            seqan-seqan-v${version}

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checksums           rmd160  c843f8c749e6f2d8ff5233f160d9683743dce7c2 \

                    sha256  d7084d17729214003e84818e0280a16f223c8f1c6a30eeef040c27e0c0047bd7 \

                    size    109626901

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compiler.cxx_standard   2014

compiler.openmp_version 3.0

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configure.args-append   -DSEQAN_BUILD_SYSTEM=SEQAN_RELEASE_APPS

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if {${os.platform} eq "darwin" && ${os.major} < 16} {

    known_fail yes

    pre-fetch {

        ui_error "${name} ${version} requires macOS 10.12 or greater."

        return -code error "Incompatible macOS version."

    }

}

​

livecheck.url       http://packages.seqan.de/

livecheck.regex     seqan-src-(\[0-9.\]+)${extract.suffix}